Example: TD-CDFT for MoS2 Monolayer (NewResponse)¶
Download NewResp_2DMoS2Restart.run
#!/bin/sh
# This example demonstrates how to calculate the frequency-dependent dielectric
# function with the help of the NewResponse implementation for a two-dimensional
# system. (see NewResponse) Furthermore, the general setup to run the TD-CDFT
# section as a restart calculation is presented as well. This allows for
# splitting of the frequency range into several parts, which can then be
# calculated in separate calculation without the overhead of evaluating the
# groundstate properties for each of them! Hence, it is a trivial
# parallelization possibility.
# =========================
# MoS2 Monolayer .xyz file:
# =========================
cat << eor > MoS2_2D_1L.xyz
3
S 0.00000000 0.00300000 -7.76123300
S 0.00000000 0.00000000 -4.53876700
Mo 1.58000000 0.91221300 -6.15000000
VEC1 3.16000000 0.00000000 0.00000000
VEC2 1.58000000 2.73664028 0.00000000
eor
# ===============================================
# Simple single point calculation (no properties)
# ===============================================
AMS_JOBNAME=MoS2 $AMSBIN/ams <<eor
Task SinglePoint
System
GeometryFile MoS2_2D_1L.xyz
End
Engine Band
UseSymmetry False
NumericalQuality good
DEPENDENCY BASIS=1e-10
Tails bas=1e-10
KSpace
Regular
NumberOfPoints 5 5
End
End
Basis
Type DZP
Core Large
End
Convergence
Criterion 1E-8
End
EndEngine
eor
# ===================================
# Restart and compute some properties
# ===================================
# Caution!
# One has to make sure to use the same
# Symmetry/NumericalQuality/KSpace/Basis/ZORA/... options for the
# ground state calculation and for the restart calculation! Otherwise a normal
# ground state SCF optimization will be performed in the restart calculation.
AMS_JOBNAME=MoS2_restart $AMSBIN/ams <<eor
Task SinglePoint
System
GeometryFile MoS2_2D_1L.xyz
End
Engine Band
UseSymmetry False
NumericalQuality good
DEPENDENCY BASIS=1e-10
Tails bas=1e-10
KSpace
Regular
NumberOfPoints 5 5
End
End
Basis
Type DZP
Core Large
End
Convergence
Criterion 1E-8
End
Restart
File MoS2.results/band.rkf
SCF
End
NewResponse
nFreq 4
FreqLow 2.0
FreqHigh 2.7
ActiveESpace 10.0
ActiveXYZ T T F
End
NewResponseSCF
nCycle 50
Criterion 1E-3
End
NewResponseKSPACE
subsimp 10
eta 1e-6
End
EndEngine
eor
# ============
# Extract info
# ============
$AMSBIN/amsreport MoS2_restart.results/band.rkf RESPDIELRE
$AMSBIN/amsreport MoS2_restart.results/band.rkf RESPDIELIM
# The results are accessible via the standard output or via the prop.kf file.
# For the latter, one can use the AMSreport command $AMSBIN/amsreport prop.kf
# RESPDIELRE and $AMSBIN/amsreport prop.kf RESPDIELIM to print the components
# of the dielectric function for the real (RESPDIELRE) and imaginary
# (RESPDIELIM) part separately. In the following tables, only the diagonal
# components are presented:
# Real part
# Frequency (au) epsilon_1(XX) epsilon_1(YY) epsilon_1(ZZ)
# 0.0735 8.1622063 8.1788067 1.8845925
# 0.0772 8.7718566 8.7960299 1.8891231
# 0.0808 9.6251443 9.6631930 1.8941277
# 0.0845 10.9457271 11.0126367 1.8996502
# 0.0882 13.4618956 13.6001321 1.9057858
# 0.0919 26.5135344 25.9300685 1.9126665
# 0.0955 6.1134118 4.1756368 1.9204849
# 0.0992 6.2789015 4.6880515 1.9295347
# 0.1029 13.7665058 11.5484340 1.9403044
# 0.1066 -7.2575153 -5.8285172 1.9537079
# 0.1102 -0.7937277 1.2661253 1.9718981
# Imaginary part
# Frequency (au) epsilon_2(XX) epsilon_2(YY) epsilon_2(ZZ)
# 0.0735 0.0015601 0.0015758 0.0000213
# 0.0772 0.0020566 0.0020839 0.0000200
# 0.0808 0.0029274 0.0029798 0.0000216
# 0.0845 0.0047632 0.0048794 0.0000231
# 0.0882 0.0104743 0.0107877 0.0000246
# 0.0919 0.2658531 0.1942899 0.0000264
# 0.0955 12.8856772 14.5286319 0.0000294
# 0.0992 9.7571573 10.1567455 0.0000338
# 0.1029 7.5936072 6.7674596 0.0000399
# 0.1066 13.0264038 9.5897946 0.0000487
# 0.1102 0.2483041 0.3222301 0.0000676
# The more convenient option is to plot the spectral data directly with the help
# of AMSspectra. Just type: $AMSBIN/amsspectra prop.kf