Force field format specification¶
Each force field file consist of following sections:
Section name | N of params | N of header lines | N of block keys | block keys |
General | 41 | 1 | ||
Atoms | 32 | 4 | 1 | atom type name |
Bonds | 16 | 2 | 2 | atom type index |
Off-diagonal | 6 | 1 | 2 | atom type index |
Angles | 7 | 1 | 3 | atom type index |
Torsions | 7 | 1 | 4 | atom type index |
Hydrogen bonds | 4 | 1 | 2 | atom type index |
Format¶
The force field file begins with a description line that, in turn, may optionally begin with a list of keywords between square brackets, for example (for an ACKS2+eReaxff force-field):
[ ereaxff acks2 ] Reactive MD-force field for Ethylene Carbonate and Li
Each section starts with one or more header line containing, on the first line, the number of blocks in the section, possibly followed by description of the parameters. The number of header lines is supposed to match the number lines in a block of the corresponding section (4 in atoms, 2 in bonds and 1 in every other section). The additional header lines after the first are skipped when reading the force field file.
General parameters
The header of this section starts with npar, the number of general parameters present in the force field file. The ehader is followed by npar lines each containing a parameter value followed by a comment, for example:
39 ! Number of general parameters
50.0000 !Overcoordination parameter
Atoms
The atomic parameters section starts with the number of atom types present in the force field, followed by three additional header lines and the blocks of parameters, one block per atom type. Each block consists of 4 lines starting with a line containing the atom name and 8 parameter values with the (1x,a2,8f9.4) format followed by three lines with 8 parameter values each, with the (3x,8f9.4) format, for example:
3 ! Nr of atoms; cov.r; valency;a.m;Rvdw;Evdw;gammaEEM;cov.r2;#
alfa;gammavdW;valency;Eunder;Eover;chiEEM;etaEEM;n.u.
cov r3;Elp;Heat inc.;n.u.;n.u.;n.u.;n.u.
ov/un;val1;n.u.;val3,vval4
C 1.3817 4.0000 12.0000 1.8903 0.1838 0. 9000 1.1341 4.0000
9.7559 2.1346 4.0000 34.9350 79.5548 5. 9666 7.0000 0.0000
1.2114 0.0000 202.5551 8.9539 34.9289 13. 5366 0.8563 0.0000
-2.8983 2.5000 1.0564 4.0000 2.9663 0. 0000 0.0000 0.0000
H 0.7853 1.0000 1.0080 1.5904 0.0419 1.0206 -0.1000 1.0000
9.3557 5.0518 1.0000 0.0000 121.1250 5.3200 7.4366 1.0000
-0.1000 0.0000 62.4879 1.9771 3.3517 0.7571 1.0698 0.0000
-15.7683 2.1488 1.0338 1.0000 2.8793 0.0000 0.0000 0.0000
... one more block ...
Bonds, angles, etc.
In the remaining sections, a block key consists of two or more integer numbers, each of them referring to the atomic block with this index. The number of integers in the key depends on the block type (two for bonds, three for valence angles, etc.). For instance, the bond parameters block below corresponds to the C-H bond for the atoms block shown above.
The bond parameters section starts with the number of bond types followed by one additional comment line. The first line of the block has the (2i3,8f9.4) format and the second (6x,8f9.4):
6 ! Nr of bonds; Edis1; LPpen;n.u.;pbe1;pbo5;13corr;pbo6
pbe2;pbo3;pbo4;n.u.;pbo1;pbo2;ovc orr
1 1 156.5953 100.0397 80.0000 -0.8157 -0.4591 1.0000 37.7369 0.4235
0.4527 -0.1000 9.2605 1.0000 -0.0750 6.8316 1.0000 0.0000
... five more blocks ...
For the rest of the sections, the format remains similar to the bonds section, except that they do not have additional header lines and the Fortran format may be slightly different: (2i3,6f9.4) for off-diagonal,(3i3,7f9.4) for valence angles, (4i3,7f9.4) for torsion angles, and (3i3,4f9.4) for hydrogen bonds.
Equation Reference¶
In the tables below the ReaxFF parameters are listed with their corresponding equation numbers from the SCM developer notes which have mostly technical relevance. For a good introduction to the meaning of ReaxFF parameters we advise the initial ReaxFF publication ReaxFF: A Reactive Force Field for Hydrocarbons, A.C.T. van Duin, S. Dasgupta, F. Lorant, W.A. Goddard, J. Phys. Chem. A. 2001 105 41 9396-9409.
General
Of particular interest are the upper taper radius parameter (#13), which describes the non-bonded cutoff radius, and the bond order cutoff (#30), which describes the bond order threshold, above which atoms are considered connected. Both these parameters may have a major impact on the ReaxFF calculation speed; decreasing the taper radius or increasing the bond order cutoff can make ReaxFF run considerably faster. These parameters, however, have a significant impact on the force description and should not be changed without re-parameterization of other parts of the force field.
Index | Name in Eq | Equation | Comment |
1 | p_boc1 | 4c | Overcoordination parameter |
2 | p_boc2 | 4d | Overcoordination parameter |
3 | -p_coa2 | 15 | Valency angle conjugation parameter |
4 | p_trip4 | 20 | Triple bond stabilization parameter |
5 | p_trip3 | 20 | Triple bond stabilization parameter |
6 | k_c2 | 19 | C2-correction |
7 | p_ovun6 | 12 | Undercoordination parameter |
8 | p_trip2 | 20 | Triple bond stabilization parameter |
9 | p_ovun7 | 12 | Undercoordination parameter |
10 | p_ovun8 | 12 | Undercoordination parameter |
11 | p_trip1 | 20 | Triple bond stabilization energy |
12 | n/a | 21 | Lower Taper-radius |
13 | R_cut | 21 | Upper Taper-radius |
14 | p_fe1 | 6a | Fe dimer correction |
15 | p_val6 | 13c | Valency undercoordination |
16 | p_lp1 | 8 | Valency angle/lone pair parameter |
17 | p_val9 | 13f | Valency angle parameter |
18 | p_val10 | 13g | Valency angle parameter |
19 | p_fe2 | 6a | Fe dimer correction |
20 | p_pen2 | 14a | Double bond/angle parameter |
21 | p_pen3 | 14b | Double bond/angle parameter: overcoord |
22 | p_pen4 | 14b | Double bond/angle parameter: overcoord |
23 | p_fe3 | 6a | Fe dimer correction |
24 | p_tor2 | 16b | Torsion/BO parameter |
25 | p_tor3 | 16c | Torsion overcoordination |
26 | p_tor4 | 16c | Torsion overcoordination |
27 | p_elho | 26a | eReaxFF |
28 | p_cot2 | 17b | Conjugation |
29 | p_vdW1 | 23b | VdW shielding |
30 | cutoff * 100 | 3a,b | Cutoff for bond order (* 100) |
31 | p_coa4 | 15 | Valency angle conjugation parameter |
32 | p_ovun4 | 11b | Overcoordination parameter |
33 | p_ovun3 | 11b | Overcoordination parameter |
34 | p_val8 | 13d | Valency/lone pair parameter |
35 | X_soft | 25 | ACKS2 softness parameter |
36 | unused | n/a | n/a |
37 | p_val | 27 via n_el | eReaxFF |
38 | n/a | 13d | if 1: remove delta_j term for non-C-C-C angles and where none of the atoms is N |
39 | p_coa3 | 15 | Valency angle conjugation parameter |
40 | n/a | 20 | Condition to turn triple bond option: vpar(40) == 1 |
41 | n/a | 26 via Tap(R) | eReax-specific taper radius for interactions with/between electrons and holes |
Atoms
If negative values are provided to either of the three bond radii (sigma, pi, and double pi) the bond order contributions are ignored for that atom.
Index | Name in Eq | Equation | Comment |
1 | r_0^sigma | 2 | Sigma bond covalent radius |
2 | Val_i | 3a, 4b, 5, 9a | Valency |
3 | n/a | 9a | Atomic mass |
4 | r_vdW | 23a | van der Waals radius |
5 | D_ij | 23a | van der Waals dissociation energy |
6 | gamma_i | 24 | gammaEEM; EEM shielding |
7 | r_0^pi | 2 | Pi bond covalent radius |
8 | Val_i^e | 7, 8, 9 | Number of valence electrons |
9 | alpha_ij | 23b | van der Waals parameter |
10 | 1/gamma_w | 23b | van der Waals shielding |
11 | Val_j^angle | 16c, 13c | Valency for 1,3-BO correction |
12 | p_ovun5 | 12 | Undercoordination energy |
13 | p_i^xel2 | 26 | eReaxFF, atom type parameter |
14 | chi_i | 24, 25 | EEM electronegativity |
15 | eta_i | 24, 25 | EEM hardness |
16 | n/a | n/a | Donor or acceptor switch in H-bonds |
17 | r_0^pi | 2 | Double pi bond covalent radius |
18 | p_lp2 | 10 | Lone pair energy |
19 | n/a | n/a | Atomic heat of formation |
20 | p_boc4 | 4e,f | Bond order correction |
21 | p_boc3 | 4e,f | Bond order correction |
22 | p_boc5 | 4e,f | Bond order correction |
23 | C_i | 25 | Atomic softness cutoff parameter |
24 | alpha, alpha_i | 26, 26a | eReaxFF, constant, dependent on atom type |
25 | p_ovun2 | 12 | Valence angle parameter |
26 | p_val3 | 13b -> 13a | Valence angle parameter |
27 | beta, beta_i | 26a | eReaxFF, constant, dependent on atom type |
28 | Val_i^’boc | 3b | Number of lone pairs |
29 | p_val5 | 13b | Valence angle parameter |
30 | p_c1 | 23c | Inner wall vdW repulsion parameter |
31 | p_c2 | 23c | Inner wall vdW repulsion parameter |
32 | p_c3 | 23c | Inner wall vdW repulsion parameter |
33 | C_i | 23d | Lg dispersion parameter |
34 | R_eij | 23d | VdW Radius for Lg dispersion correction |
Bonds
1 | D_e^sigma | 6, 11a | Sigma-bond dissociation energy |
2 | D_e^pi | 6 | Pi-bond dissociation energy |
3 | D_e^pipi | 6 | Double pi-bond dissociation energy |
4 | p_be1 | 6 | Bond energy parameter |
5 | p_bo5 | 2 | Double pi bond parameter |
6 | Val’_i^boc | 3b | 1,3-Bond order correction |
7 | p_bo6 | 2 | Double pi bond order |
8 | p_ovun1 | 11a | Overcoordination penalty |
9 | p_be2 | 6 | Bond energy parameter |
10 | p_bo3 | 2 | Pi bond order parameter |
11 | p_bo4 | 2 | Pi bond order parameter |
12 | unused | n/a | n/a |
13 | p_bo1 | 2 | Sigma bond order |
14 | p_bo2 | 2 | Sigma bond order |
15 | delta’_i | 3a | Uncorrected BO overcoordination |
16 | p_ij^xel1 | 27 | e ReaxFF param; for adjusting number of electrons available to host atom |
Off-diagonal
This section allows for the definition of off-diagonal values for both bond order and van der Waals pair interactions. By default, ReaxFF calculates these terms from the combination rules and the atom parameters (i.e. the default C-H van der Waals radius is (RvdW[C]*RvdW[H])0.5), but the off-diagonal section allows for the definition of different values. Any value given in the off-diagonal section overrules that obtained from the combination rules.
1 | D_ij | 23a | VdW energy |
2 | r_vdW | 23a | VdW radius |
3 | alpha_ij | 23a | VdW parameter |
4 | r_0^sigma | 2 | Sigma bond length |
5 | r_0^pi | 2 | Pi bond length |
6 | r_0^pipi | 2 | PiPi bond length |
7 | C_i, C_lg,ij | 23d | Lg dispersion parameter |
Angles
1 | Theta_0,0 | 13g | 180o-(equilibrium angle) |
2 | p_val1 | 13a | Valence angle parameter |
3 | p_val2 | 13a | Valence angle parameter |
4 | p_coa1 | 15 | Valence conjugation |
5 | p_val7 | 13c | Undercoordination |
6 | p_pen1 | 14b -> 14a | Penalty energy |
7 | p_val4 | 13b | Valence angle parameter |
Torsions
1 | V_1 | 16a | V1-torsion barrier |
2 | V_2 | 16a | V2-torsion barrier |
3 | V_3 | 16a | V3-torsion barrier |
4 | p_tor1 | 16a | Torsion angle parameter |
5 | p_cot1 | 17a | Conjugation energy |
6 | unused | n/a | n/a |
7 | unused | n/a | n/a |
Hydrogen bonds
1 | r_hb^0 | 18 | Hydrogen bond equilibrium distance |
2 | p_hb1 | 18 | Hydrogen bond energy |
3 | -p_hb2 | 18 | Hydrogen bond/bond order |
4 | -p_hb3 | 18 | Hydrogen bond parameter |