#!/usr/bin/env amspython from scm.plams import * """ Script to get and print the first 5 frames as PLAMS Molecules from an ams.rkf trajectory. The script also shows how to print a speciic frame, frame 23. Set the correct path to ams.rkf below, and then run as $AMSBIN/amspython MoleculesFromRKFTrajectory.py """ def main(): job = AMSJob.load_external('ams.rkf') # modify to give the path to the ams.rkf file trajectory = Trajectory(job.results.rkfpath()) for i, mol in enumerate(trajectory, 1): print(f"frame {i}") print(mol) # mol is a PLAMS Molecule if i == 5: break print("Extracting specific molecule") mol = job.results.get_history_molecule(23) print("Frame 23") print(mol) if __name__ == '__main__': main()